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14th September 2011

Tuesday, 14th September 2011
Location: MRC Human Genetics Unit, Edinburgh
Directions: Here
Contact: James Prendergast or Urmi Trivedi

Agenda
*Suggested 20 minutes presentations. If you need more, contact James.
Time and topic proposed by
12:30 to 13:30 Lunch in E3 large meeting room
13:30 to 14:00 Benchtop sequencers and bacteria (IonTorrent and MiSeq), Nick Loman, Birmingham
14:00 to 14:30 Genomic Graffiti:Quantifying gene expression and TSS usage with Helicos CAGE Martin Taylor, HGU
14:30 to 14:50 Biological Replicates versus read depth in RNA-seq experimental design, Frances Turner, Roslin
14:50 to 15:10 Coffee, Location TBC
15:10 to 15:30 RNA-seq analysis for (by) dummies: how we think it's done and your chance to tell us we're wrong, Jon Manning and Donald Dunbar (CVS, Edinburgh)
15:30 to 15:50 Investigating the link between nucleosomes, histone modifications and DNA evolution using ChIP-seq, James Prendergast, HGU

Participants
Confirm name / Vegetarian
Peter Cock
Le Yu
Urmi Trivedi Yes
James Prendergast
Nick Loman
Daniel Barker
Martin Taylor
Joseph Hughes Yes
Marco Morelli
Duncan Godwin
Jonathan Manning Yes
Donald Dunbar
Duncan Sproul
Ian Jackson
Amy Capper
Richard Mort
Seanna McTaggart
Liz Patton Yes
Chris Cole
Simon Harding
Veronique Vitart
Pau Navarro
Richard Meehan
Pedro Coutinho
Nick Gilbert
Andy Sims
Xingjun Pi
David Melton
Leisha Nolen
Wendy Bickmore
Philippe Gautier
Wenhua Wei
Susan Farrington
Stewart Morris
Richard Baldock
Claudia Cabrera
Caroline Hayward
Jennifer Huffman
Dasa Longman
Graham Hamilton
Harsh Vaidya
Stewart Morris
Stephanie Tetelin
Florian Halbritter
Sara Macias
Sara Perricone
Alex Lubbock
Ian Overton Yes
Julie Rodor
Micha Bayer
Zen Lu
Kamna Ramakrishnan
Christelle Robert Yes
Gaganjot Kaur Yes
Mark Blaxter Yes
Bruce Aronow
Mathieu Unbekandt
Pawel Herzyk
Tony McBryan
Emily Richardson
Sunitha Manjari Yes
Ruma Banerjee Yes
Stephen Bridgett Yes
Frances Turner
Li-Yin Ooi
Graham Thomas
Georgios Koutsovoulos
Jane Charlesworth