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9th November2011

Tuesday, 9th November 2011
Location: Lecture Theathre 1, Ashworth Labs, king's Buildings Campus, University of Edinburgh
Parking: Halhead Road, Ross Road and Gordon Terrace ussually have free parking slots available
Venue: Ashworth Labs, King's Buidlings Campus, University of Edinburgh
Agenda
*Suggested 20 minutes presentations
Time and topic introduced by
12:30 - 13:20 Lunch - in seminar rooms B and C, Ashworth Labs
13:20 - 14:00 Bio-Linux, a community-driven computing platform, Tim Booth and Mesude Bicak, from NERC Biomolecular Analysis Facility
14:00 - 14:30 An introduction to RNA- and ChIP-Seq analysis using Genomatix tools, Korbinian Grote, Genomatix
14:30 - 15:00 Tea/Coffee - in seminar rooms B and C, Ashworth Labs
15:00 - 15:30 De novo transcriptome assembly using short Illumina reads, Gaganjot Kaur, Genepool
15:30 - 16:00 Comparative Genomics of Pseudomonas aeruginosa host adaptation and strain variation, Nicholas Tucker, Strathclyde Institute of Pharmacy and Biomedical Sciences, University of Strathclyde
16:00 - 16:20 Comparison of differential expression methods in RNAseq Chris Cole & The DAG, University of Dundee

Participants
Confirm name / Vegetarian
Urmi Trivedi Yes
James Prendergast
Le Yu
Laura Jeacock Yes
Timothee Cezard
Gaganjot Kaur Yes
Nick Schurch
Marco Morelli
Graham Thomas
Chris Cole
Achim Schnaufer Yes
Christelle Robert
Stephen Bridgett Yes
Ross Fraser
Ben Elsworth Yes
Zen Lu
Gabriele Schweikert
Peter Cock
Pawel Herzyk
Akshay Bhat Yes
Valeria Marasco
Mark Blaxter Yes
Darren Obbard
Micha Bayer
Donald Dunbar
Jon Manning Yes
Tim Booth Yes
Mesude Bicak Yes
Korbinian Grote
Stuart Taylor
Karim Gharbi
Peter Troshin
Jose Campos
Beate Nurnberger
Seanna McTaggart
Mark Fell
Nicholas Tucker
Lewis Stewart
Georgios Koutsovoulos
Svetlana Fomina
Florian Halbritter
Michaël Bekaert
Emily Richardson
Jane Charlesworth Yes
Shaun Webb
Alastair Kerr